Package: BNPmix 1.0.2

BNPmix: Bayesian Nonparametric Mixture Models

Functions to perform Bayesian nonparametric univariate and multivariate density estimation and clustering, by means of Pitman-Yor mixtures, and dependent Dirichlet process mixtures for partially exchangeable data. See Corradin et al. (2021) <doi:10.18637/jss.v100.i15> for more details.

Authors:Riccardo Corradin [aut, cre], Antonio Canale [ctb], Bernardo Nipoti [ctb]

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BNPmix.pdf |BNPmix.html✨
BNPmix/json (API)

# Install 'BNPmix' in R:

install.packages('BNPmix', repos = c('https://rcorradin.r-universe.dev', 'https://cloud.r-project.org'))

Uses libs:

openblas– Optimized BLAS
c++– GNU Standard C++ Library v3
openmp– GCC OpenMP (GOMP) support library

On CRAN:

This package does not link to any Github/Gitlab/R-forge repository. No issue tracker or development information is available.

openblas cpp openmp

3.08 score 24 scripts 363 downloads 18 exports 74 dependencies

Last updated 3 years agofrom:820b3d670b. Checks:1 ERROR, 10 NOTE. Indexed: yes.

Target	Result	Latest binary
Doc / Vignettes	FAIL	Feb 05 2025
R-4.5-win-x86_64	NOTE	Feb 05 2025
R-4.5-mac-x86_64	NOTE	Feb 05 2025
R-4.5-mac-aarch64	NOTE	Feb 05 2025
R-4.5-linux-x86_64	NOTE	Feb 05 2025
R-4.4-win-x86_64	NOTE	Feb 05 2025
R-4.4-mac-x86_64	NOTE	Feb 05 2025
R-4.4-mac-aarch64	NOTE	Feb 05 2025
R-4.3-win-x86_64	NOTE	Feb 05 2025
R-4.3-mac-x86_64	NOTE	Feb 05 2025
R-4.3-mac-aarch64	NOTE	Jan 06 2025

Exports:BNPdens2coda BNPdens2coda.BNPdens BNPmix_BIN BNPmix_psm BNPmix_VI_LB BNPpart clean_partition dBNPdens dBNPdens.BNPdens DDPdensity partition partition.BNPdens plot.BNPdens print.BNPdens PYcalibrate PYdensity PYregression summary.BNPdens

Dependencies:abind backports boot broom car carData cli coda colorspace corrplot cowplot cpp11 Deriv doBy dplyr fansi farver Formula generics ggplot2 ggpubr ggrepel ggsci ggsignif glue gridExtra gtable isoband labeling lattice lifecycle lme4 magrittr MASS Matrix MatrixModels mgcv microbenchmark minqa modelr munsell nlme nloptr nnet numDeriv pbkrtest pillar pkgconfig polynom purrr quantreg R6 rbibutils RColorBrewer Rcpp RcppArmadillo RcppDist RcppEigen Rdpack reformulas rlang rstatix scales SparseM stringi stringr survival tibble tidyr tidyselect utf8 vctrs viridisLite withr

Vignettes and/or manual for this package failed to build, some documents may be unavailable. Please inspect thebuild logs for more information.

R packages: LaTeX vignettes

Rendered fromBNPmix.ltxusingR.rsp::texon Feb 05 2025.

Last update: 2021-11-23
Started: 2021-07-25

Help page	Topics
BNPdens class constructor	BNPdens
Export to coda interface	BNPdens2coda.BNPdens
BNPpart class constructor	BNPpart
Evaluate estimated univariate densities at a given point	dBNPdens.BNPdens
MCMC for GM-dependent Dirichlet process mixtures of Gaussians	DDPdensity
Estimate the partition of the data	partition.BNPdens
Density plot for BNPdens class	plot.BNPdens
BNPdens print method	print.BNPdens
Pitman-Yor prior elicitation	PYcalibrate
MCMC for Pitman-Yor mixtures of Gaussians	PYdensity
MCMC for Pitman-Yor mixture of Gaussian regressions	PYregression
BNPdens summary method	summary.BNPdens

Package: BNPmix 1.0.2

BNPmix: Bayesian Nonparametric Mixture Models

R packages: LaTeX vignettes

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